Enjoy the sweet, comforting flavor of cinnamon rolls in a healthy muffin form! These Cinnamon Roll Protein Muffins are packed with protein, lightly sweetened, and perfect for breakfast, snacks, or post-workout fuel.
Why You’ll Love This Recipe
- Fluffy, soft muffins with a cinnamon swirl
- Packed with protein for a healthy boost
- Perfect for breakfast, snacks, or meal prep
- Sweet flavor without excessive sugar
- Easy to make in under 30 minutes
Ingredients

- 1 1/2 cups oat flour (or finely ground oats)
- 1/2 cup protein powder (vanilla or unflavored)
- 1 teaspoon baking powder
- 1/2 teaspoon baking soda
- 1/4 teaspoon salt
- 1 teaspoon ground cinnamon
- 1/2 teaspoon nutmeg
- 1/2 cup Greek yogurt
- 1/4 cup unsweetened applesauce
- 2 eggs
- 1/4 cup honey or maple syrup
- 1 teaspoon vanilla extract
Cinnamon Swirl
- 2 tablespoons brown sugar
- 1 teaspoon ground cinnamon
Step-by-Step Instructions

- Preheat oven to 350°F (175°C) and line a 12-cup muffin tin with liners.
- In a large bowl, whisk together oat flour, protein powder, baking powder, baking soda, salt, cinnamon, and nutmeg.
- In a separate bowl, mix Greek yogurt, applesauce, eggs, honey (or maple syrup), and vanilla extract.
- Add wet ingredients to dry ingredients and stir until just combined.
- In a small bowl, mix brown sugar and cinnamon for the swirl.
- Fill muffin cups halfway with batter, sprinkle a little cinnamon-sugar mixture, then top with remaining batter.
- Use a toothpick or skewer to gently swirl the cinnamon-sugar into the batter.
- Bake for 18–22 minutes, or until a toothpick inserted in the center comes out clean.
- Allow muffins to cool for 5 minutes before transferring to a wire rack.
Tips & Variations
- Swap oat flour for almond flour for a nutty flavor.
- Add mini chocolate chips or raisins for extra sweetness.
- Use dairy-free yogurt to make it vegan-friendly.
- Top with a light drizzle of cream cheese glaze for a true cinnamon roll experience.
- Store in an airtight container to maintain softness.
Storage & Freezer Instructions
- Store cooled muffins in an airtight container at room temperature for up to 3 days.
- Refrigerate for up to 1 week.
- Freeze muffins individually or in batches for up to 3 months.
- Reheat in the microwave or oven before serving.
Serving & Pairing Ideas

- Enjoy with a cup of coffee, tea, or warm milk.
- Pair with fresh fruit or yogurt for a wholesome breakfast.
- Spread nut butter on top for extra protein.
- Perfect as a post-workout snack.
Frequently Asked Questions
Can I use all-purpose flour instead of oat flour?
Yes, but the texture will be slightly less dense and lower in fiber.
Can I make these muffins gluten-free?
Use certified gluten-free oats and protein powder to make the muffins gluten-free.
Can I reduce the sweetener?
Yes, you can reduce honey or maple syrup by 1–2 tablespoons to suit your taste.
Can I make a larger batch?
Absolutely! Double the ingredients and bake in two muffin tins.
Ready to Make It?
Cinnamon Roll Protein Muffins are a healthy, protein-packed treat with the comforting taste of cinnamon rolls. Quick to make and perfect for on-the-go, these muffins are a must-try for breakfast or snack time.
You Might Also Like
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- No Bake Chocolate Peanut Butter Bars – Quick and rich treat.
Cinnamon Roll Protein Muffins
- Total Time: 30 mins
- Yield: 12 muffins 1x
- Diet: Vegetarian
Description
Cinnamon Roll Protein Muffins are soft, fluffy, and packed with protein. With a subtle cinnamon-sugar swirl, they’re perfect for breakfast, snacks, or post-workout fuel.
Ingredients
1 1/2 cups oat flour (or finely ground oats)
1/2 cup protein powder (vanilla or unflavored)
1 teaspoon baking powder
1/2 teaspoon baking soda
1/4 teaspoon salt
1 teaspoon ground cinnamon
1/2 teaspoon nutmeg
1/2 cup Greek yogurt
1/4 cup unsweetened applesauce
2 eggs
1/4 cup honey or maple syrup
1 teaspoon vanilla extract
Cinnamon Swirl:
2 tablespoons brown sugar
1 teaspoon ground cinnamon
Instructions
1. Preheat oven to 350°F (175°C) and line a 12-cup muffin tin with liners.
2. In a large bowl, whisk together oat flour, protein powder, baking powder, baking soda, salt, cinnamon, and nutmeg.
3. In a separate bowl, mix Greek yogurt, applesauce, eggs, honey (or maple syrup), and vanilla extract.
4. Add wet ingredients to dry ingredients and stir until just combined.
5. In a small bowl, mix brown sugar and cinnamon for the swirl.
6. Fill muffin cups halfway with batter, sprinkle a little cinnamon-sugar mixture, then top with remaining batter.
7. Use a toothpick or skewer to gently swirl the cinnamon-sugar into the batter.
8. Bake for 18–22 minutes, or until a toothpick inserted in the center comes out clean.
9. Allow muffins to cool for 5 minutes before transferring to a wire rack.
Notes
Swap oat flour for almond flour for a nutty flavor.
Add mini chocolate chips or raisins for extra sweetness.
Use dairy-free yogurt to make it vegan-friendly.
Top with a light cream cheese glaze for a true cinnamon roll experience.
Store in an airtight container to maintain softness.
- Prep Time: 10 mins
- Cook Time: 20 mins
- Category: Baked Goods
- Method: Baking
- Cuisine: American
Nutrition
- Serving Size: 1 muffin
- Calories: 150
- Sugar: 8 g
- Sodium: 120 mg
- Fat: 4 g
- Saturated Fat: 1.5 g
- Unsaturated Fat: 2 g
- Trans Fat: 0 g
- Carbohydrates: 22 g
- Fiber: 3 g
- Protein: 8 g
- Cholesterol: 25 mg